org.dcm4che3.tool.mkkos

Class MkKOS

java.lang.Object

org.dcm4che3.tool.mkkos.MkKOS

public class MkKOS
extends Object

Author:

Gunter Zeilinger , Michael Backhaus

Field Summary

Fields

Modifier and Type	Field and Description
private Attributes	attrs
private Properties	codes
private Sequence	contentSeq
private Attributes	documentTitle
private Attributes	documentTitleModifier
private DicomEncodingOptions	encOpts
private Sequence	evidenceSeq
private String	fname
private String	instanceNumber
private String	keyObjectDescription
private Attributes	kos
private String	locationUID
private boolean	nofmi
private static int[]	PATIENT_AND_STUDY_ATTRS
private static ResourceBundle	rb
private String	retrieveAET
private String	retrieveURL
private String	seriesNumber
private String	tsuid
private String	uidSuffix

Constructor Summary

Constructors

Constructor and Description
MkKOS()

Method Summary

Modifier and Type	Method and Description
boolean	addInstance(Attributes inst)
static void	addOptions(org.apache.commons.cli.Options opts)
private static void	configure(MkKOS main, org.apache.commons.cli.CommandLine cl)
private Attributes	contentItem(String valueType, Attributes refSOP)
private Attributes	createKOS(Attributes inst)
private Attributes	documentTitleModifier()
private static String	documentTitleOf(org.apache.commons.cli.CommandLine cl)
String	getFname()
private Attributes	keyObjectDescription()
static void	main(String[] args)
static String	outputFileOf(org.apache.commons.cli.CommandLine cl)
private static org.apache.commons.cli.CommandLine	parseComandLine(String[] args)
private Sequence	refSeriesSeq(String studyIUID)
private Attributes	refSOP(String cuid, String iuid)
private Sequence	refSOPSeq(Sequence refSeriesSeq, String seriesIUID)
void	setCodes(Properties codes)
void	setDocumentTitle(Attributes codeItem)
void	setDocumentTitleModifier(Attributes codeItem)
void	setEncodingOptions(DicomEncodingOptions encOpts)
void	setInstanceNumber(String instanceNumber)
void	setKeyObjectDescription(String keyObjectDescription)
void	setLocationUID(String locationUID)
void	setNoFileMetaInformation(boolean nofmi)
void	setOutputFile(String fname)
void	setRetrieveAET(String retrieveAET)
void	setRetrieveURL(String retrieveURL)
void	setSeriesNumber(String seriesNumber)
void	setTransferSyntax(String tsuid)
void	setUIDSuffix(String uidSuffix)
private Attributes	templateIdentifier()
Attributes	toCodeItem(String codeValue)
private String	valueTypeOf(Attributes inst)
void	writeKOS()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

rb

private static ResourceBundle rb

PATIENT_AND_STUDY_ATTRS

private static final int[] PATIENT_AND_STUDY_ATTRS

attrs

private final Attributes attrs

uidSuffix

private String uidSuffix

fname

private String fname

nofmi

private boolean nofmi

encOpts

private DicomEncodingOptions encOpts

tsuid

private String tsuid

seriesNumber

private String seriesNumber

instanceNumber

private String instanceNumber

keyObjectDescription

private String keyObjectDescription

retrieveAET

private String retrieveAET

retrieveURL

private String retrieveURL

locationUID

private String locationUID

documentTitle

private Attributes documentTitle

documentTitleModifier

private Attributes documentTitleModifier

codes

private Properties codes

kos

private Attributes kos

evidenceSeq

private Sequence evidenceSeq

contentSeq

private Sequence contentSeq

Constructor Detail

MkKOS

public MkKOS()

Method Detail

getFname

public String getFname()

setUIDSuffix

public final void setUIDSuffix(String uidSuffix)

setOutputFile

public void setOutputFile(String fname)

setNoFileMetaInformation

public void setNoFileMetaInformation(boolean nofmi)

setEncodingOptions

public final void setEncodingOptions(DicomEncodingOptions encOpts)

setTransferSyntax

public final void setTransferSyntax(String tsuid)

setSeriesNumber

public final void setSeriesNumber(String seriesNumber)

setInstanceNumber

public final void setInstanceNumber(String instanceNumber)

setKeyObjectDescription

public final void setKeyObjectDescription(String keyObjectDescription)

setRetrieveAET

public void setRetrieveAET(String retrieveAET)

setRetrieveURL

public void setRetrieveURL(String retrieveURL)

setLocationUID

public void setLocationUID(String locationUID)

setCodes

public final void setCodes(Properties codes)

setDocumentTitle

public final void setDocumentTitle(Attributes codeItem)

setDocumentTitleModifier

public final void setDocumentTitleModifier(Attributes codeItem)

main

public static void main(String[] args)
                 throws Exception

Throws:

Exception

parseComandLine

private static org.apache.commons.cli.CommandLine parseComandLine(String[] args)
                                                           throws org.apache.commons.cli.ParseException

Throws:

org.apache.commons.cli.ParseException

addOptions

public static void addOptions(org.apache.commons.cli.Options opts)

configure

private static void configure(MkKOS main,
                              org.apache.commons.cli.CommandLine cl)
                       throws Exception

Throws:

Exception

outputFileOf

public static String outputFileOf(org.apache.commons.cli.CommandLine cl)
                           throws org.apache.commons.cli.MissingOptionException

Throws:

org.apache.commons.cli.MissingOptionException

documentTitleOf

private static String documentTitleOf(org.apache.commons.cli.CommandLine cl)
                               throws org.apache.commons.cli.MissingOptionException

Throws:

org.apache.commons.cli.MissingOptionException

toCodeItem

public Attributes toCodeItem(String codeValue)

addInstance

public boolean addInstance(Attributes inst)

writeKOS

public void writeKOS()
              throws IOException

Throws:

IOException

refSeriesSeq

private Sequence refSeriesSeq(String studyIUID)

refSOPSeq

private Sequence refSOPSeq(Sequence refSeriesSeq,
                           String seriesIUID)

valueTypeOf

private String valueTypeOf(Attributes inst)

refSOP

private Attributes refSOP(String cuid,
                          String iuid)

createKOS

private Attributes createKOS(Attributes inst)

templateIdentifier

private Attributes templateIdentifier()

documentTitleModifier

private Attributes documentTitleModifier()

keyObjectDescription

private Attributes keyObjectDescription()

contentItem

private Attributes contentItem(String valueType,
                               Attributes refSOP)